

The Avogadro application provides a rich graphical interface using dynamically loaded plugins through the library itself.
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The work presented here details the Avogadro library, which is a framework providing a code library and application programming interface (API) with three-dimensional visualization capabilities and has direct applications to research and education in the fields of chemistry, physics, materials science, and biology. By using the CML file format as its native document type, Avogadro seeks to enhance the semantic accessibility of chemical data types.

Typical uses include building molecular structures, formatting input files, and analyzing output of a wide variety of computational chemistry packages. It offers flexible, high quality rendering, and a powerful plugin architecture. The Avogadro project has developed an advanced molecule editor and visualizer designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. The main problem you'll find is that like with many open source collaborations, it is prone to bugs and errors so it may crash at any time.Īn excellent scientific tool that allows flexibility for those that want to develop plugins but is easy enough for anyone to use. Avogadro is based on Open Babel according to the developers and in future, will also offer scripting options. Probably the best aspect of this program for those with some coding knowledge is that it can be easily extended and developed via plugins. This can be done simply by using the mouse buttons and dragging the molecules on their three axis. The aim has been to make 3D molecular manipulation as easy as possible and even if your not a scientists, it's quite entertaining just creating your own different coloured structures that look good. It works across platforms and is used in computational chemistry, molecular modeling, bio informatics, material science and other related areas. Avogadro is an application purely for scientists and students that have to draw three-dimensional molecular compositions that showing a molecule from every conceivable angle and perspective.
